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Creators/Authors contains: "Ostadabbas, S"

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  1. Multi-view learning is a rapidly evolving research area focused on developing diverse learning representations. In neural data analysis, this approach holds immense potential by capturing spatial, temporal, and frequency features. Despite its promise, multi-view application to functional near-infrared spectroscopy (fNIRS) has remained largely unexplored. This study addresses this gap by introducing fNIRSNET, a novel framework that generates and fuses multi-view spatio-temporal representations using convolutional neural networks. It investigates the combined informational strength of oxygenated (HbO2) and deoxygenated (HbR) hemoglobin signals, further extending these capabilities by integrating with electroencephalography (EEG) networks to achieve robust multimodal classification. Experiments involved classifying neural responses to auditory stimuli with nine healthy participants. fNIRS signals were decomposed into HbO2/HbR concentration changes, resulting in Parallel and Merged input types. We evaluated four input types across three data compositions: balanced, subject, and complete datasets. Our fNIRSNET's performance was compared with eight baseline classification models and merged it with four common EEG networks to assess the efficacy of combined features for multimodal classification. Compared to baselines, fNIRSNET using the Merged input type achieved the highest accuracy of 83.22%, 81.18%, and 91.58% for balanced, subject, and complete datasets, respectively. In the complete set, the approach effectively mitigated class imbalance issues, achieving sensitivity of 83.58% and specificity of 95.42%. Multimodal fusion of EEG networks and fNIRSNET outperformed single-modality performance with the highest accuracy of 87.15% on balanced data. Overall, this study introduces an innovative fusion approach for decoding fNIRS data and illustrates its integration with established EEG networks to enhance performance. 
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  2. Factor analysis methods have been widely used in neuroimaging to transfer high dimensional imaging data into low dimensional, ideally interpretable representations. However, most of these methods overlook the highly nonlinear and complex temporal dynamics of neural processes when factorizing their imaging data. In this paper, we present deep Markov factor analysis (DMFA), a generative model that employs Markov property in a chain of low dimensional temporal embeddings together with spatial inductive assumptions, all related through neural networks, to capture temporal dynamics in functional magnetic resonance imaging (fMRI) data, and tackle their high spatial dimensionality, respectively. Augmented with a discrete latent, DMFA is able to cluster fMRI data in its low dimensional temporal embedding with regard to subject and cognitive state variability, therefore, enables validation of a variety of fMRI-driven neuroscientific hypotheses. Experimental results on both synthetic and real fMRI data demonstrate the capacity of DMFA in revealing interpretable clusters and capturing nonlinear temporal dependencies in these high dimensional imaging data. 
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